Input Sequence
Notes: T/t will be treated as U/u for analysis & prediction. Ambiguous bases (e.g., N) are counted as “Other” and ignored in MW.
Section 1 — Sequence Analysis
Section 2 — Toy Dot-Bracket Secondary Structure (Nussinov)
Heuristic, for short sequences (≤ 500 nt). Pairs: AU, GC, and GU wobble; min hairpin loop = 3.
Arcs view will appear after prediction.
Section 3 — Add sequence ➜ reverse ➜ U→T ➜ complement (A↔T, G↔C)